Generation and analysis of an Eucalyptus globulus cDNA library constructed from seedlings subjected to low temperature conditions
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Keywords

cellulose
cold-temperature
EST database
forest biotechnology
lignin

How to Cite

1.
Rasmussen-Poblete S, Valdes J, Gamboa MC, Valenzuela PD, Krauskopf E. Generation and analysis of an Eucalyptus globulus cDNA library constructed from seedlings subjected to low temperature conditions. Electron. J. Biotechnol. [Internet]. 2008 Apr. 15 [cited 2024 Dec. 22];11(2):0-. Available from: https://www.ejbiotechnology.info/index.php/ejbiotechnology/article/view/v11n2-14

Abstract

Eucalyptus globulus is the most important commercial temperate hardwood in the world because of its wood properties and due to its characteristics for biofuel production. However, only a very low number of expressed sequence tags (ESTs) are publicly available for this tree species. We constructed a cDNA from E. globulus seedlings subjected to low temperature and sequenced 9,913 randomly selected clones, generating 8,737 curated ESTs. The assembly produced 1,062 contigs and 3,879 singletons forming a Eucalyptus unigene set. Based on BLASTX analysis, 89.3% of the contigs and 88.5% of the singletons had significant similarity to known genes in the non-redundant database of GenBank. The Eucalyptus unigene set generated is a valuable public resource that provides an initial model for genes and regulatory pathways involved in cell wall biosynthesis at low temperature.

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